BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E03LP1|AL426219
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1377 1534 0.0
>3x_Contig1377
Length = 8397
Score = 1534 bits (773), Expect = 0.0
Identities = 782/785 (99%)
Strand = Plus / Minus
Query: 1 ccaccgtcgatgatttgattgatgttcttgaagctccatcaagaaggtatatgccagcca 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 8025 ccaccgtcgatgatttgattgatgtacttgaagctccatcaagaaggtatatgccagcta 7966
Query: 61 tttatgtgctaaacaagatagattctttgtcattagaagaattggaacttttatacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7965 tttatgtgctaaacaagatagattctttgtcattagaagaattggaacttttatacagaa 7906
Query: 121 ttccaaatgcagttccaatctcttctggtaaggaatggaatttggatgaactactagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7905 ttccaaatgcagttccaatctcttctggtaaggaatggaatttggatgaactactagaag 7846
Query: 181 ttatgtgggatagactaaacttagtccgtgtttatactaagccaaagggtacgatgcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7845 ttatgtgggatagactaaacttagtccgtgtttatactaagccaaagggtacgatgcctg 7786
Query: 241 atttcacagacccagtggtgttaaggtcggataggtgtaccgtaagagatttctgtaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7785 atttcacagacccagtggtgttaaggtcggataggtgtaccgtaagagatttctgtaacc 7726
Query: 301 aaattcacaaatctttagttgaggacttcagaaatgctttagtgtacggcagccgtgtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7725 aaattcacaaatctttagttgaggacttcagaaatgctttagtgtacggcagcagtgtga 7666
Query: 361 agcatcaacctcaatatgtggggcttaatcacacattagaagatgaagatgttgtcacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7665 agcatcaacctcaatatgtggggcttaatcacacattagaagatgaagatgttgtcacaa 7606
Query: 421 ttttgaagaaatgaatacaggctactttttttttctcattcttctcaccgtcatcatagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7605 ttttgaagaaatgaatacaggctactttttttttctcattcttctcaccgtcatcatagt 7546
Query: 481 ttttagcattttcatcgcattttcatgtagtgttatccattttatttaacagctttccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7545 ttttagcattttcatcgcattttcatgtagtgttatccattttatttaacagctttccat 7486
Query: 541 agacggatctggttagattatcgtaaacgttcattactcaggttgccataacttctgtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7485 agacggatctggttagattatcgtaaacgttcattactcaggttgccataacttctgtta 7426
Query: 601 aacattaactcaatactgatttgtcgtgttatgtttaaattcataaatagtagtaaatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7425 aacattaactcaatactgatttgtcgtgttatgtttaaattcataaatagtagtaaatat 7366
Query: 661 atgatattttgtgaaatcgatagcaacggatacatatggcctttttatattggccaacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7365 atgatattttgtgaaatcgatagcaacggatacatatggcctttttatattggccaacat 7306
Query: 721 atatgttaagatataaaagcaatgatggatgctgatggtgatatggaaagaaagaatgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 atatgttaagatataaaagcaatgatggatgctgatggtgatatggaaagaaagaatgaa 7246
Query: 781 tgaat 785
|||||
Sbjct: 7245 tgaat 7241
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7785
Number of Sequences: 1807
Number of extensions: 7785
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)